add_periodic_boundary(PMPeriodicBoundary &_periodic_bdry) | libMesh::PointMesh< KDDim > | inline |
build_elem_neighbor_list(const Elem *elem, const bool is_sorted, std::vector< std::size_t > &n_list) | libMesh::PointMesh< KDDim > | virtual |
build_elem_neighbor_list() | libMesh::PointMesh< KDDim > | virtual |
build_particle_neighbor_list(const Point &query_pt, const bool is_sorted, std::vector< std::pair< std::size_t, Real > > &IndicesDists) | libMesh::PointMesh< KDDim > | virtual |
build_particle_neighbor_list() | libMesh::PointMesh< KDDim > | virtual |
build_particle_neighbor_list_naively() | libMesh::PointMesh< KDDim > | virtual |
clear_kd_tree() | libMesh::PointMesh< KDDim > | virtual |
construct_kd_tree() | libMesh::PointMesh< KDDim > | protectedvirtual |
elem_neighbor_list() const | libMesh::PointMesh< KDDim > | inline |
elem_neighbor_list(const Elem *elem) | libMesh::PointMesh< KDDim > | inline |
is_sorted() const | libMesh::PointMesh< KDDim > | inline |
local_elem_neighbor_list(const Elem *elem) | libMesh::PointMesh< KDDim > | inline |
maximum_bead_velocity() const | libMesh::PointMesh< KDDim > | inline |
minimum_bead_velocity() const | libMesh::PointMesh< KDDim > | inline |
num_bonds() const | libMesh::PointMesh< KDDim > | inline |
num_chains() const | libMesh::PointMesh< KDDim > | inline |
num_particles() const | libMesh::PointMesh< KDDim > | inline |
particles() const | libMesh::PointMesh< KDDim > | inline |
pm_periodic_boundary() | libMesh::PointMesh< KDDim > | inline |
PointMesh(libMesh::ParticleMesh< KDDim > &particle_mesh, const Real &search_radius_p, const Real &search_radius_e) | libMesh::PointMesh< KDDim > | |
PointMesh(MeshBase &mesh, std::vector< PolymerChain > &polymer_chains, const Real &search_radius_p, const Real &search_radius_e) | libMesh::PointMesh< KDDim > | |
PointMesh(MeshBase &mesh, PolymerChain &polymer_chain, const Real &search_radius_p, const Real &search_radius_e) | libMesh::PointMesh< KDDim > | |
polymer_chain() const | libMesh::PointMesh< KDDim > | inline |
print_elem_neighbor_list(std::ostream &out=libMesh::out) const | libMesh::PointMesh< KDDim > | |
print_point_info() const | libMesh::PointMesh< KDDim > | |
reinit(const bool &with_hi, bool &neighbor_list_update_flag) | libMesh::PointMesh< KDDim > | |
reinit_neighbor_vector() | libMesh::PointMesh< KDDim > | virtual |
search_radius(const std::string &p_e) const | libMesh::PointMesh< KDDim > | |
set_bead_velocity(const std::vector< Real > &vel) | libMesh::PointMesh< KDDim > | |
set_search_radius(const Real rp, const Real re) | libMesh::PointMesh< KDDim > | inline |
update_particle_mesh(ParticleMesh< KDDim > *particle_mesh) const | libMesh::PointMesh< KDDim > | |
write_initial_surface_node_pos() const | libMesh::PointMesh< KDDim > | |
~PointMesh() | libMesh::PointMesh< KDDim > | |